BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB018C01LP1|AL427277
(691 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1721 1352 0.0
>3x_Contig1721
Length = 17834
Score = 1352 bits (682), Expect = 0.0
Identities = 688/690 (99%)
Strand = Plus / Plus
Query: 1 gatcagacttgctagattaaaaattttcgatggaagtgaacatccatacaagagtgatat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 2332 gatcagacttgctagattaaaaattttcgatggaagtgaacatccatacaagagtaatat 2391
Query: 61 caccgcatttgctgatcagcaactagagctgcaacaccagaagaaatagtgtggatgaat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2392 caccgcatttgctgatcagcaactagagctgcaacaccagaagaaatagtgtggatgaat 2451
Query: 121 ttttatgtgacttcttaatttttgagaagttaacggcagcatgtgatgtaaaatccctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2452 ttttatgtgacttcttaatttttgagaagttaacggcagcatgtgatgtaaaatccctgt 2511
Query: 181 atatattattattcgatctaaatggttctccttagtacgcatacaatgtctgtcgttttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2512 atatattattattcgatctaaatggttctccttagtacgcatacaatgtctgtcgttttt 2571
Query: 241 cactgtactaaactcttccactttactatgtacatatagattgttatttagatatgttaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2572 cactgtactaaactcttccactttactatgtacatatagattgttatttagatatgttaa 2631
Query: 301 ttatcacatacaaatcacatacaaatcacatacagagatagaaaagatattacatcgcag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2632 ttatcacatacaaatcacatacaaatcacatacagagatagaaaagatattacatcgcag 2691
Query: 361 tatgccaaagcataatacttttgcctggaagaaagaacatttaacagaacaaaaacgaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2692 tatgccaaagcataatacttttgcctggaagaaagaacatttaacagaacaaaaacgaga 2751
Query: 421 agaattagggaaggatgtatttcatatttgatattatttcccttgctccaaaagacgatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2752 agaattagggaaggatgtatttcatatttgatattatttcccttgctccaaaagacgatc 2811
Query: 481 tacttttgcttccaaagcagccagaatttcatctttgcgggtattttcctcggttaattt 540
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 2812 tacttttgcttccaaagcagcaagaatttcatctttgcgggtattttcctcggttaattt 2871
Query: 541 atcaatatagctttccaactttagaactaatccagataatgtttctacagattgtctcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2872 atcaatatagctttccaactttagaactaatccagataatgtttctacagattgtctcaa 2931
Query: 601 attgagagacttgttcgtagatgctccagctgctgctgctgctccagctgctgctgctgc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2932 attgagagacttgttcgtagatgctccagctgctgctgctgctccagctgctgctgctgc 2991
Query: 661 tccagctgcgccacctgtattcggattgga 690
||||||||||||||||||||||||||||||
Sbjct: 2992 tccagctgcgccacctgtattcggattgga 3021
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6705
Number of Sequences: 1807
Number of extensions: 6705
Number of successful extensions: 510
Number of sequences better than 1.0e-20: 1
length of query: 691
length of database: 10,358,551
effective HSP length: 16
effective length of query: 675
effective length of database: 10,329,639
effective search space: 6972506325
effective search space used: 6972506325
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)